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open_dbm/dashboard/flask-server/process_input_data.py
Carla Floricel 05e52aa52b first commit
2022-08-02 09:52:52 -04:00

155 lines
5.7 KiB
Python

import pandas as pd
import json
from os.path import exists
def read_derivedAttr(ar):
derivedFilename = ar+"/derived_variables/derived_output.csv"
if not exists(derivedFilename):
return pd.DataFrame()
derived_df = pd.read_csv(derivedFilename)
facial_cols = [col for col in derived_df if "fac_" in col]
acoustic_cols = [col for col in derived_df if "aco_" in col]
movement_cols = [col for col in derived_df if "mov_" in col]
nlp_cols = [col for col in derived_df if "nlp_" in col]
derived_facial = derived_df.loc[:,derived_df.columns.isin(facial_cols)]
derived_acoustic = derived_df.loc[:,derived_df.columns.isin(acoustic_cols)]
derived_movement = derived_df.loc[:,derived_df.columns.isin(movement_cols)]
derived_nlp = derived_df.loc[:,derived_df.columns.isin(nlp_cols)]
ids = derived_df["Filename"].tolist()
return {"ids": ids,
"facialAttr": facial_cols, "acousticAttr": acoustic_cols, "movementAttr": movement_cols, "speechAttr": nlp_cols}
def read_medatada(ar, ar2):
metaData={}
metdataFilename = ar+"/"+ar2
if exists(metdataFilename):
metadataDf = pd.read_csv(metdataFilename)
metaData = metadataDf.to_json(orient="records")
return metaData
def read_derivedDf(ar):
derivedFilename = ar+"/derived_variables/derived_output.csv"
if not exists(derivedFilename):
return pd.DataFrame()
derived_df = pd.read_csv(derivedFilename)
return derived_df
def read_rawFacialDf(ar, id):
skip_cols = ["frame", "face_id", "error_reason", "timestamp", "confidence", "success", "dbm_master_url", "error_reason", " confidence", " face_id", " success", " timestamp", "s_confidence", ]
facial_asym_filename = ar + "/raw_variables/"+id+"/facial/face_asymmetry/"+id+"_facasym.csv"
facial_au_filename = ar + "/raw_variables/"+id+"/facial/face_au/"+id+"_facau.csv"
facial_expr_filename = ar + "/raw_variables/"+id+"/facial/face_expressivity/"+id+"_facemo.csv"
if not exists(facial_asym_filename) or not exists(facial_au_filename) or not exists(facial_expr_filename):
return pd.DataFrame()
facial_asym = pd.read_csv(facial_asym_filename)
facial_asym_cols = [col for col in facial_asym if col not in skip_cols]
facial_au = pd.read_csv(facial_au_filename)
facial_au_cols = [col for col in facial_au if col not in skip_cols]
facial_expr = pd.read_csv(facial_expr_filename)
facial_expr_cols = [col for col in facial_expr if col not in skip_cols and "AU" not in col]
face_df = facial_asym.loc[:, ~facial_asym.columns.isin(skip_cols)].copy()
for el in facial_au_cols:
face_df[el] = facial_au[el]
for el in facial_expr_cols:
face_df[el] = facial_expr[el]
return face_df.fillna(0)
def read_rawMovementDf(ar, id):
skip_cols = ["error_reason", "dbm_master_url", "Frames", " Frames"]
gaze_filename = ar + "/raw_variables/"+id+"/movement/gaze/"+id+"_eyegaze.csv"
head_movement_filename = ar + "/raw_variables/"+id+"/movement/head_movement/"+id+"_headmov.csv"
head_pose_filename = ar + "/raw_variables/"+id+"/movement/head_pose/"+id+"_headpose.csv"
if not exists(gaze_filename) or not exists(head_movement_filename) or not exists(head_pose_filename):
return pd.DataFrame()
gaze = pd.read_csv(gaze_filename)
gaze_cols = [col for col in gaze if col not in skip_cols]
head_movement = pd.read_csv(head_movement_filename)
head_movement_cols = [col for col in head_movement if col not in skip_cols]
head_pose = pd.read_csv(head_pose_filename)
head_pose_cols = [col for col in head_pose if col not in skip_cols]
movement_df = head_pose.loc[:, ~head_pose.columns.isin(skip_cols)].copy()
for el in head_movement_cols:
movement_df[el] = head_movement[el]
for el in gaze_cols:
movement_df[el] = gaze[el]
return movement_df.fillna(0)
def read_rawAcousticDf(ar, id):
skip_cols = ["error_reason", "dbm_master_url", "Frames", " Frames", "aco_voicelabel"]
fm_filename = ar + "/raw_variables/"+id+"/acoustic/formant_freq/"+id+"_formant.csv"
gne_filename = ar + "/raw_variables/"+id+"/acoustic/glottal_noise/"+id+"_gne.csv"
hnr_filename = ar + "/raw_variables/"+id+"/acoustic/harmonic_noise/"+id+"_hnr.csv"
intt_filename = ar + "/raw_variables/"+id+"/acoustic/intensity/"+id+"_intensity.csv"
mfcc_filename = ar + "/raw_variables/"+id+"/acoustic/mfcc/"+id+"_mfcc.csv"
pitch_filename = ar + "/raw_variables/"+id+"/acoustic/pitch/"+id+"_pitch.csv"
if not exists(fm_filename) or not exists(gne_filename) or not exists(hnr_filename) or not exists(intt_filename) or not exists(mfcc_filename) or not exists(pitch_filename):
return pd.DataFrame
fm = pd.read_csv(fm_filename)
fm_cols = [col for col in fm if col not in skip_cols]
gne = pd.read_csv(gne_filename)
gne_cols = [col for col in gne if col not in skip_cols]
hnr = pd.read_csv(hnr_filename)
hnr_cols = [col for col in hnr if col not in skip_cols]
intt = pd.read_csv(intt_filename)
intt_cols = [col for col in intt if col not in skip_cols]
mfcc = pd.read_csv(mfcc_filename)
mfcc_cols = [col for col in mfcc if col not in skip_cols]
pitch = pd.read_csv(pitch_filename)
pitch_cols = [col for col in pitch if col not in skip_cols]
acoustic_df = fm.loc[:, ~fm.columns.isin(skip_cols)].copy()
for el in gne_cols:
acoustic_df[el] = gne[el]
for el in hnr_cols:
acoustic_df[el] = hnr[el]
for el in intt_cols:
acoustic_df[el] = intt[el]
for el in mfcc_cols:
acoustic_df[el] = mfcc[el]
for el in pitch_cols:
acoustic_df[el] = pitch[el]
return acoustic_df.fillna(0)
def load():
global videoIds
read_derivedAttr()
read_derivedDf()
if __name__=="__main__":
load()